Gene Expression Data Classification Using Consensus Independent Component Analysis
نویسندگان
چکیده
منابع مشابه
Gene Expression Data Classification Using Consensus Independent Component Analysis
We propose a new method for tumor classification from gene expression data, which mainly contains three steps. Firstly, the original DNA microarray gene expression data are modeled by independent component analysis (ICA). Secondly, the most discriminant eigenassays extracted by ICA are selected by the sequential floating forward selection technique. Finally, support vector machine is used to cl...
متن کاملIndependent component analysis-based penalized discriminant method for tumor classification using gene expression data
MOTIVATION Microarrays are capable of determining the expression levels of thousands of genes simultaneously. One important application of gene expression data is classification of samples into categories. In combination with classification methods, this technology can be useful to support clinical management decisions for individual patients, e.g. in oncology. Standard statistic methodologies ...
متن کاملISpace: Interactive Volume Data Classification Techniques Using Independent Component Analysis
This paper introduces an interactive classification technique for volume data, called ISpace, which uses Independent Component Analysis (ICA) and a multidimensional histogram of the volume data in a transformed space. Essentially, classification in the volume domain becomes equivalent to interactive clipping in the ICA space, which as demonstrated using several examples is more intuitive and di...
متن کاملTopographic Independent Component Analysis of Gene Expression Time Series Data
Topographic independent component analysis (TICA) is an interesting extension of the conventional ICA, which aims at finding a linear decomposition into approximately independent components with the dependence between two components is approximated by their proximity in the topographic representation. In this paper we apply the topographic ICA to gene expression time series data and compare it ...
متن کاملGene Expression Data Classification With Kernel Principal Component Analysis
One important feature of the gene expression data is that the number of genes M far exceeds the number of samples N. Standard statistical methods do not work well when N < M. Development of new methodologies or modification of existing methodologies is needed for the analysis of the microarray data. In this paper, we propose a novel analysis procedure for classifying the gene expression data. T...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Genomics, Proteomics & Bioinformatics
سال: 2008
ISSN: 1672-0229
DOI: 10.1016/s1672-0229(08)60022-4